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development:fns [2018/10/21 14:58]
42.49.180.224 [How it works]
development:fns [2017/08/17 11:21] (current)
127.0.0.1 external edit
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 ====== How it works ====== ====== How it works ======
 First create and store the system matrix in output file data.h5: First create and store the system matrix in output file data.h5:
-&lt;code&gt;+<code>
 # Example of linux shell command: # Example of linux shell command:
 elecsfwd --img smri-seghead --electrodes electrodes.h5 --data data.h5 --contable ​ ../​../​data/​conductivity/​contable.csv --TOL 1e-8' elecsfwd --img smri-seghead --electrodes electrodes.h5 --data data.h5 --contable ​ ../​../​data/​conductivity/​contable.csv --TOL 1e-8'
-&lt;/code&gt;+</code>
  
 The smri-seghead file is the name of a analyze format file (.hdr, .img) which contains the segmentations with the assigned tissue values (e.g. gray matter = 1, white matter =2, or single sphere = 1). The smri-seghead file is the name of a analyze format file (.hdr, .img) which contains the segmentations with the assigned tissue values (e.g. gray matter = 1, white matter =2, or single sphere = 1).
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 contable.csv is a comma saparated file which assigns a conductivity value for each tissue type present in the analyze file. contable.csv is a comma saparated file which assigns a conductivity value for each tissue type present in the analyze file.
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 ====== Steps to be taken ====== ====== Steps to be taken ======