CONTENTS
Note that this reference documentation is identical to the help that is displayed in MATLAB when you type “help Contents”.
FieldTrip Version unknown www.fieldtriptoolbox.org DD-MM-YYYY FieldTrip is the MATLAB toolbox for MEG and EEG analysis that is being developed at the Centre for Cognitive Neuroimaging of the Donders Institute for Brain, Cognition and Behaviour together with collaborating institutes. The FieldTrip software is released as open source under the GNU general public license. The FieldTrip toolbox includes algorithms for simple and advanced analysis of MEG and EEG data, such as time-frequency analysis, source reconstruction using dipoles, distributed sources and beamformers and non-parametric statistical testing. It supports the data formats of all major MEG systems (CTF, Neuromag, BTi) and of the most popular EEG systems, and new formats can be added easily. FieldTrip contains high-level functions that you can use to construct your own analysis protocol in MATLAB. Furthermore, it easily allows developers to incorporate low-level algorithms for new EEG/MEG analysis methods. The FieldTrip software is free but copyrighted software, distributed under the terms of the GNU General Public Licence as published by the Free Software Foundation (either version 2, or at your option any later version). See the file COPYING for more details. The functions in this toolbox are copyrighted by their respective authors: Robert Oostenveld, DCCN, FCDC, SMI, MBFYS Jan-Mathijs Schoffelen, CCNi, FCDC Pascal Fries, FCDC Markus Bauer, FCDC Ole Jensen, FCDC Markus Siegel, FCDC, UKE Jens Schwarzbach, FCDC Eric Maris, DCC, FCDC Ingrid Nieuwenhuis, DCCN, FCDC Saskia Haegens, DCCN, FCDC Vladimir Litvak, UCL Eelke Spaak, DCCN Jorn Horschich, DCCN Roemer van der Meij, DCC Lilla Magyari, MPI, DCCN and others ... Copyrights (C) 2008-2017, Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen, The Netherlands (DCCN, DCC, DCN) Copyrights (C) 2011-2017, Max Planck Institute for Psycholynguistics, Nijmegen, The Netherlands (MPI) Copyrights (C) 2007-2017, The Wellcome Trust Centre for Neuroimaging, University College London, UK (UCL) Copyrights (C) 2008-2010, Centre for Cognitive Neuroimaging, Glasgow, United Kingdom (CCNi) Copyrights (C) 2003-2008, F.C. Donders Centre, Radboud University Nijmegen, The Netherlands (FCDC) Copyrights (C) 2004-2007, Nijmegen Institute for Cognition and Information, Radboud University Nijmegen, The Netherlands (NICI) Copyrights (C) 2004-2005, Universitatsklinikum Hamburg-Eppendorf, Germany (UKE) Copyrights (C) 2003-2004, Center for Sensory Motor Interaction, University Aalborg, Denmark (SMI) Copyrights (C) 1999-2003, Department of Medical Physics, Radboud University Nijmegen, The Netherlands (MBFYS) The FieldTrip toolbox depend on functions from other toolboxes to do a large part of the actual work, such as reading data from binary files and forward and inverse modelling of the EEG/MEG. These low-level functions are contained in the private subdirectory. These other toolboxes on which the framework depends are copyrighted by their respective authors, see each individual MATLAB file for the details. Unauthorised copying and distribution of functions that are not explicitely covered by the GPL is not allowed! Below is an overview of the most important FieldTrip functions, sorted by category. You can get more details on a function by typing "help functionname" in MATLAB. Preprocessing and reading data ft_definetrial ft_rejectartifact ft_rejectvisual ft_preprocessing ft_appenddata ft_resampledata ft_channelrepair ft_recodeevent ft_redefinetrial ft_databrowser ft_read_header ft_read_data ft_read_event ft_read_mri Event-Related Fields or Potentials ft_timelockanalysis ft_timelockgrandaverage ft_timelockstatistics ft_singleplotER ft_topoplotER ft_multiplotER Frequency and Time-Frequency analysis ft_freqanalysis ft_freqgrandaverage ft_freqdescriptives ft_freqstatistics ft_singleplotTFR ft_topoplotTFR ft_multiplotTFR Source analysis ft_dipolefitting ft_dipolesimulation ft_sourceanalysis ft_sourcegrandaverage ft_sourcedescriptives ft_sourcestatistics ft_sourceplot ft_sourceinterpolate ft_prepare_localspheres ft_prepare_singleshell ft_prepare_bemmodel ft_prepare_leadfield ft_prepare_atlas ft_volumelookup Statistical analysis ft_timelockstatistics ft_freqstatistics ft_sourcestatistics Plotting and display of data ft_prepare_layout ft_layoutplot ft_singleplotER ft_multiplotER ft_topoplotER ft_singleplotTFR ft_multiplotTFR ft_topoplotTFR ft_topoplotCC ft_multiplotCC ft_sourceplot ft_clusterplot