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reference:contents [2018/08/23 14:43] (current)
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 +=====  CONTENTS =====
 +
 +Note that this reference documentation is identical to the help that is displayed in MATLAB when you type "help Contents"​.
 +
 +<​html><​pre>​
 +  FieldTrip
 +  Version unknown www.fieldtriptoolbox.org DD-MM-YYYY
 + 
 +  FieldTrip is the MATLAB toolbox for MEG and EEG analysis that is being developed at
 +  the Centre for Cognitive Neuroimaging of the Donders Institute for Brain, Cognition
 +  and Behaviour together with collaborating institutes. The FieldTrip software is
 +  released as open source under the GNU general public license.
 + 
 +  The FieldTrip toolbox includes algorithms for simple and advanced analysis of MEG and
 +  EEG data, such as time-frequency analysis, source reconstruction using dipoles,
 +  distributed sources and beamformers and non-parametric statistical testing. It
 +  supports the data formats of all major MEG systems (CTF, Neuromag, BTi) and of the
 +  most popular EEG systems, and new formats can be added easily. FieldTrip contains
 +  high-level functions that you can use to construct your own analysis protocol in
 +  MATLAB. Furthermore,​ it easily allows developers to incorporate low-level algorithms
 +  for new EEG/MEG analysis methods.
 + 
 +  The FieldTrip software is free but copyrighted software, distributed under the terms
 +  of the GNU General Public Licence as published by the Free Software Foundation (either
 +  version 2, or at your option any later version). See the file COPYING for more
 +  details.
 +  ​
 +  The functions in this toolbox are copyrighted by their respective authors:
 +    Robert Oostenveld, DCCN, FCDC, SMI, MBFYS
 +    Jan-Mathijs Schoffelen, CCNi, FCDC
 +    Pascal Fries, FCDC
 +    Markus Bauer, FCDC
 +    Ole Jensen, FCDC
 +    Markus Siegel, FCDC, UKE
 +    Jens Schwarzbach,​ FCDC
 +    Eric Maris, DCC, FCDC
 +    Ingrid Nieuwenhuis,​ DCCN, FCDC
 +    Saskia Haegens, DCCN, FCDC
 +    Vladimir Litvak, UCL
 +    Eelke Spaak, DCCN
 +    Jorn Horschich, DCCN
 +    Roemer van der Meij, DCC
 +    Lilla Magyari, MPI, DCCN
 +    and others ...
 + 
 +  Copyrights (C) 2008-2017, Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen, The Netherlands (DCCN, DCC, DCN)
 +  Copyrights (C) 2011-2017, Max Planck Institute for Psycholynguistics,​ Nijmegen, The Netherlands (MPI)
 +  Copyrights (C) 2007-2017, The Wellcome Trust Centre for Neuroimaging,​ University College London, UK (UCL)
 +  Copyrights (C) 2008-2010, Centre for Cognitive Neuroimaging,​ Glasgow, United Kingdom (CCNi)
 +  Copyrights (C) 2003-2008, F.C. Donders Centre, Radboud University Nijmegen, The Netherlands (FCDC)
 +  Copyrights (C) 2004-2007, Nijmegen Institute for Cognition and Information,​ Radboud University Nijmegen, The Netherlands (NICI)
 +  Copyrights (C) 2004-2005, Universitatsklinikum Hamburg-Eppendorf,​ Germany (UKE)
 +  Copyrights (C) 2003-2004, Center for Sensory Motor Interaction,​ University Aalborg, Denmark (SMI)
 +  Copyrights (C) 1999-2003, Department of Medical Physics, Radboud University Nijmegen, The Netherlands (MBFYS)
 + 
 +  The FieldTrip toolbox depend on functions from other toolboxes to do a large part of
 +  the actual work, such as reading data from binary files and forward and inverse
 +  modelling of the EEG/MEG. These low-level functions are contained in the private
 +  subdirectory. These other toolboxes on which the framework depends are copyrighted by
 +  their respective authors, see each individual MATLAB file for the details.
 + 
 +  Unauthorised copying and distribution of functions that are not explicitely covered by
 +  the GPL is not allowed!
 + 
 +  Below is an overview of the most important FieldTrip functions, sorted by category.
 +  You can get more details on a function by typing "help functionname"​ in MATLAB.
 + 
 +  Preprocessing and reading data
 +    ft_definetrial
 +    ft_rejectartifact
 +    ft_rejectvisual
 +    ft_preprocessing
 +    ft_appenddata
 +    ft_resampledata
 +    ft_channelrepair
 +    ft_recodeevent
 +    ft_redefinetrial
 +    ft_databrowser
 +    ft_read_header
 +    ft_read_data
 +    ft_read_event
 +    ft_read_mri
 + 
 +  Event-Related Fields or Potentials
 +    ft_timelockanalysis
 +    ft_timelockgrandaverage
 +    ft_timelockstatistics
 +    ft_singleplotER
 +    ft_topoplotER
 +    ft_multiplotER
 + 
 +  Frequency and Time-Frequency analysis
 +    ft_freqanalysis
 +    ft_freqgrandaverage
 +    ft_freqdescriptives
 +    ft_freqstatistics
 +    ft_singleplotTFR
 +    ft_topoplotTFR
 +    ft_multiplotTFR
 + 
 +  Source analysis
 +    ft_dipolefitting
 +    ft_dipolesimulation
 +    ft_sourceanalysis
 +    ft_sourcegrandaverage
 +    ft_sourcedescriptives
 +    ft_sourcestatistics
 +    ft_sourceplot
 +    ft_sourceinterpolate
 +    ft_prepare_localspheres
 +    ft_prepare_singleshell
 +    ft_prepare_bemmodel
 +    ft_prepare_leadfield
 +    ft_prepare_atlas
 +    ft_volumelookup
 + 
 +  Statistical analysis
 +    ft_timelockstatistics
 +    ft_freqstatistics
 +    ft_sourcestatistics
 + 
 +  Plotting and display of data
 +    ft_prepare_layout
 +    ft_layoutplot
 +    ft_singleplotER
 +    ft_multiplotER
 +    ft_topoplotER
 +    ft_singleplotTFR
 +    ft_multiplotTFR
 +    ft_topoplotTFR
 +    ft_topoplotCC
 +    ft_multiplotCC
 +    ft_sourceplot
 +    ft_clusterplot
 +</​pre></​html>​