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reference:ft_omri_align_scan [2018/08/23 14:43] (current)
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 +=====  FT_OMRI_ALIGN_SCAN =====
 +
 +Note that this reference documentation is identical to the help that is displayed in MATLAB when you type "help ft_omri_align_scan"​.
 +
 +<​html><​pre>​
 +  function [model, mat_r, mat_a, Va] = ft_omri_align_scan(model,​ Vo)
 + 
 +  Estimate 6-DOF motion parameters and align volume Vo with reference model.
 + 
 +  INPUTS
 +  model - data structure containing reference image and flags
 +  Vo    - original image (to be registered to the reference model
 + 
 +  OUTPUTS
 +  model - same as input, but with modified voxel mask (for keeping track of "​missing voxels"​)
 +  Va    - aligned image (possibly rotated + translated version of Vo)
 +  mat_r - parameters of 6-dof transformation in homogenous matrix form
 +          transformation from world coordinates of Vo to world coordinates of reference
 +  mat_a - pixel to world coordinate matrix of Vo (absolute "​position"​ of Vo)
 +</​pre></​html>​