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reference:ft_omri_quality [2018/08/23 14:43] (current)
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 +=====  FT_OMRI_QUALITY =====
 +
 +Note that this reference documentation is identical to the help that is displayed in MATLAB when you type "help ft_omri_quality"​.
 +
 +<​html><​pre>​
 +  <a href=/​reference/​ft_omri_quality><​font color=green>​FT_OMRI_QUALITY</​font></​a>​ implements an online fMRI quality assurance stack
 + 
 +  Use as
 +    ft_omri_quality(cfg)
 +  where cfg is a structure with configuration settings.
 + 
 +  Configuration options are
 +    cfg.input ​           = FieldTrip buffer containing raw scans (default='​buffer://​localhost:​1972'​)
 +    cfg.numDummy ​        = how many scans to ignore initially ​   (default=0)
 +    cfg.showRawVariation = 1 to show variation in raw scans (default), 0 to show var. in processed scans
 +    cfg.clipVar ​         = threshold to clip variation plot with as a fraction of signal magnitude (default=0.2)
 +    cfg.lambda ​          = forgetting factor for the variaton plot (default=0.9)
 +    cfg.serial ​          = serial port (default = /​dev/​ttyS0),​ set [] to disable motion reporting
 +    cfg.baudrate ​        = serial port baudrate (default = 19200)
 +    cfg.maxAbs ​          = threshold (mm) for absolute motion before '​A'​ is sent to serial port, default = Inf
 +    cfg.maxRel ​          = threshold (mm) for relative motion before '​B'​ is sent to serial port, default = Inf
 +</​pre></​html>​