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tutorial:shared:flipdim [2011/02/02 14:35]
arjen
tutorial:shared:flipdim [2017/08/17 11:21] (current)
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 Flipping dimensions after segmenting the volumes (gray, white, and CSF) can easily introduce offsets. Make sure they are correctly aligned with the anatomical scan. See the following procedure. ​ Flipping dimensions after segmenting the volumes (gray, white, and CSF) can easily introduce offsets. Make sure they are correctly aligned with the anatomical scan. See the following procedure. ​
  
-The example segmented data is available at [[ftp://​ftp.fcdonders.nl/​pub/​fieldtrip/​tutorial/​beamformer/​segmentedmri.mat]]. ​  +The example segmented data is available at [[ftp://​ftp.fieldtriptoolbox.org/​pub/​fieldtrip/​tutorial/​beamformer/​segmentedmri.mat]]. ​  
  
 <code matlab> <code matlab>
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 <code matlab> <code matlab>
-segmentedmriF.gray  = flipdim(segmentedmriF.gray,1); +segmentedmri.gray  = flipdim(segmentedmri.gray,1); 
-segmentedmriF.white = flipdim(segmentedmriF.white,​1);​ +segmentedmri.white = flipdim(segmentedmri.white,​1);​ 
-segmentedmriF.csf   = flipdim(segmentedmriF.csf,1);+segmentedmri.csf   = flipdim(segmentedmri.csf,1);
 </​code>​ </​code>​
 +