Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision
Previous revision
workshop:salzburg [2015/10/02 16:22]
nietzsche
workshop:salzburg [2017/08/17 11:21] (current)
Line 2: Line 2:
  
 === Where === === Where ===
-The University of Salzburg, with support from the TINNET” COST Action+The University of Salzburg, with support from the [[http://​tinnet.tinnitusresearch.net|TINNET-COST Action]] 
 + 
 +{{:​workshop:​usalzburg.png?​200|}} ​   {{:​workshop:​tinnetcost.png?​100|}}
  
 === When === === When ===
Line 8: Line 10:
  
 === Who === === Who ===
-Nietzsche Lam and Tzvetan Popov will be the lecturers and teachers+Nietzsche Lam and Tzvetan Popov will be the lecturers and teachers
 Gaetan Sanchez, Nathan Weisz and Thomas Hartmann are the local organizers. Gaetan Sanchez, Nathan Weisz and Thomas Hartmann are the local organizers.
 +
  
 === External Applicant Call === === External Applicant Call ===
-For the application please specify +Applications for this workshop are now closed. Please check out our other upcoming workshops on [[http://​fieldtriptoolbox.org/​workshop| here]]. 
-  - your background ​(MEG/​EEG ​analysis experience, topic of research), + 
-  - whether ​you have a background ​in tinntus research +===== Program ===== 
-  - why you would like to participate ​in this workshop.  + 
-Send your applications by completing [[https://docs.google.com/forms/d/​1N8pXqT4YSNDcRP6c2QXvOlva0yJPTfCoWtJiwphqO80/​viewform?​c=0&​w=1|this form]] ​with the required ​information+==== Wednesday 09 December 2015 ==== 
 +Session I 
 +  * **10:00 - 10:​15** ​  ​Registration,​ welcome and coffee 
 +  * **10:15 - 11:​15** ​  ​Lecture:​ Introduction to MEG and the FieldTrip Toolbox | //Nietzsche Lam// 
 +  ​* **11:​15 ​11:​30** ​  ​Coffee break 
 +  * **11:30 - 13:​30** ​  ​Hands-on:​ Initiation to FieldTrip; Analyzing MEG data (event-related fields)  
 +Session II 
 +  * **13:30 - 14:​45** ​  ​Lunch 
 +  * **14:45 - 15:​45** ​  ​Lecture:​ Introduction to EEG; Comparing EEG with MEG //Nietzsche Lam// 
 +  * **15:45 - 16:​00** ​  ​Coffee break 
 +  * **16:00 - 18:​00** ​  ​Hands-on:​ Analyzing ​EEG data 
 +  * **18:00 - 18:​30** ​  ​Wrap-up-the-day and Summary 
 + 
 +==== Thursday 10 December 2015 ==== 
 +Session III 
 +  * **9:00 - 10:​15** ​   Lecture: Fundamentals ​of neuronal oscillations and synchrony | //Nietzsche Lam// 
 +  * **10:15- 10:​30** ​   Coffee break 
 +  * **10:30- 12:​30** ​   Hands-On: Time-frequency Analysis of Power  
 +  * **12:30- 13:​45** ​   Lunch 
 +Session IV 
 +  * **13:45 - 14:​45** ​  ​Lecture:​ Source reconstruction in FieldTrip | //Tzvetan Popov// 
 +  * **14:45 - 15:​00** ​  ​Coffee break 
 +  * **15:00 - 17:​00** ​  ​Hands-on:​ Source Reconstruction on Oscillatory data (beamformer
 +  ​* **17:​00 ​17:​30** ​  ​Wrap-up-the-day and Summary 
 +  * **19:00 - 23:​00** ​  ​Social Event 
 +  
 +==== Friday 11 December 2015 ==== 
 +Session V 
 +  * **9:00 - 10:​15** ​   Lecture: Non-parametric permutation techniques | //Tzvetan Popov// 
 +  * **10:15- 10:​30** ​   Coffee break 
 +  * **10:30- 12:​30** ​   Hands-On: Statistical Analyses 
 +  * **12:30- 13:​45** ​   Lunch 
 +Session VI 
 +  * **13:45 - 14:​45** ​  ​FieldTrip Playground (bring your own data) | //Tzvetan Popov and Nietzsche Lam// 
 +  * **14:45 - 15:​00** ​  ​Coffee break 
 +  * **15:00 - 17:​00** ​  ​FieldTrip Playground (bring your own data) 
 +  * **17:00 - 17:​30** ​  ​Wrap-up-the-day and Closing remarks 
 + 
 +===== Getting started with the hands-on sessions ===== 
 + 
 +For the hands-on sessions ​you have to start MATLAB. To ensure that everything runs smooth, we will work with clean and well-tested version of FieldTrip that is distributed on a USB stick, rather than the version you might already have installed. (If you have a FieldTrip version dating from sometime ​in the last few weeks, that should be fine.) Importantly,​ the tutorial data does not have to be downloaded but will also be distributed on the USB stick. 
 + 
 +  - Copy the complete contents of the USB stick to your computer. 
 +  - Unzip the fieldtrip-xxxxxxxx.zip file.  
 +  - Put Subject01.zip ​in a directory called '​tutorial'​
 + 
 +<note warning>​ 
 +Depending on the unzip program you are using (e.g. Winrar), the name 
 +of the zip file might also appear as directiory, resulting in 
 +path_to_directory/fieldtrip-xxxxxxxx/fieldtrip-xxxxxxxx,​ i.ethe 
 +fieldtrip directory in a fieldtrip directory. Please fix that by 
 +moving all files one level up. 
 +</note> 
 + 
 +After copying all files to your computer and unzipping then, you start MATLAB. To ensure that the right version of fieldtrip is used, and not another version (such as the one included in SPM or EEGLAB), you type in the MATLAB command window 
 + 
 + 
 +  restoredefaultpath 
 +  cd path_to_directory/fieldtrip-xxxxxxxx 
 +  addpath(pwd) 
 +  ft_defaults 
 + 
 +<note warning>​ 
 +Please do NOT use the graphical path management tool from MATLAB. In this hands-on session we'll manage the path from the command line, but in general you are much better off using the startup.m file than the path GUI. 
 + 
 +Please do NOT add fieldtrip ​with all subdirectories,​ subdirectories will be added automatically when needed, and only when needed. 
 +</​note>​ 
 + 
 +The restoredefaultpath command clears your path, keeping only the 
 +official MATLAB toolboxes. The addpath(pwd) statement adds the 
 +present working directory, i.e. the directory containing the fieldtrip 
 +main functions. The ft_defaults command ensures that all required 
 +subdirectories are added to the path. 
 + 
 +If you get the error "​can'​t find the command ft_defaults"​ you should check the present working directory.  
 + 
 +After installing FieldTrip to your path, you change into the tutorial directory
  
-While the overarching goal of the workshop is to promote M/EEG research in understanding the neural underpinnings of tinnitus heterogeneity,​ applicants of other fields are encouraged to apply. ​+  cd path_to_directory/tutorial 
 +  ​
  
-Each accepted external attendee will be supported by the TINNET COST action up to the maximum of 400€ for travel and accommodation. ​ We will accept about 10 participants. For any question please contact Gaetan Sanchez [sanchez.gaetan[at]gmail.com]‎.